There is a wealth of analysis options for single cell data out there, which can be daunting for new users. We will discuss two popular pipelines that are tailored to biologists with some computational knowledge. This entails pre-processing through command line on computer terminals. The result can be a gene expression matrix (GEX) or Seurat … Continue reading Pre-processing of single cell data – A comparison of dropSeqPipe and Kallisto-bustools