Xuan Nguyen

  As the leader of the bioinformatics team, Xuan is responsible for looking after all aspects of our data analysis. Prior to this, Xuan gained her degree at Minerva Schools at Keck Graduate Institute (now Minerva University), San Francisco, USA in Applied Biotechnology. Xuan researched plant-extracted compounds with antiplatelet and anticoagulant properties.

   



6 Stories by Xuan Nguyen

Disclosing transcriptional profiles of a conserved GI stromal stem cell niche with Nadia

Single cell study for the population and signaling pathways of gastrointestinal stem cells niches In the human body, the development of distinct organs is...
3 min read

Cell annotation in single cell data analysis

The main goal, and challenge, in single-cell RNA sequencing data analysis is assigning cell type identity to cells. Performed after dimensionality reduction and clustering,...
4 min read

UMAP method- Dimensionality Reduction in Single Cell Genomics

Dimension reduction methods – UMAP In the previous blog, we introduced dimension reduction in single cell RNA-Sequencing (scRNA-Seq) as well as PCA and t-SNE...
3 min read

Dimensionality Reduction in Single Cell Genomics

What is dimensionality reduction? Introduced in 2009, single-cell RNA sequencing (scRNA-Seq) allows researchers to observe cellular heterogeneity of the transcriptome at the resolution of...
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t-SNE method- Dimensionality Reduction in Single Cell Genomics

Dimension reduction methods – t-SNE In the previous blog, we have introduced dimension reduction in single-cell RNA-Sequencing (scRNA-Seq) and PCA as one dimension reduction...
3 min read

PCA method – Dimensionality Reduction in Single Cell Genomics

Dimensional reduction methods – PCA In the previous blog, we introduced dimension reduction in single cell RNA-Sequencing (scRNA-Seq). We have learned that single cell...
3 min read